Gene detail information of Glyur000294s00011854 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60930.1 | 0 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_004501645.1 | 0 | PREDICTED: chromosome-associated kinesin KIF4-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|P46869|FLA10_CHLRE | 2.00E-77 | Kinesin-like protein FLA10 |
| trEMBL | tr|I1JH02|I1JH02_SOYBN | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 44109 | 58363 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011854.1 | PF00225.18 | Kinesin | 39 | 348 | 1.20E-103 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.617 |
| SRR1783600 | control | 2.600 |
| SRR1783602 | moderate drought stress | 1.591 |
| SRR1811619 | moderate drought stress | 1.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.096 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.019 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.356 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.368 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.077 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.745 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.301 |
| SRR2868004 | Drought Stress (root) | 3.499 |
| SRR2967015 | Control (root) | 4.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.283 |
| SRR9715740 | Leaf | 0.570 |
| SRR9715741 | Leaf | 0.629 |
| SRR9715739 | Root | 0.290 |
| SRR9715742 | Root | 0.660 |
| SRR9715743 | Root | 0.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.971 |
| SRR8749028 | MeJA induced 9h | 12.561 |
| SRR8749029 | MeJA induced 9h | 8.214 |
| SRR8749030 | Uninduced | 5.955 |
| SRR8749031 | Uninduced | 8.278 |
| SRR8749032 | Uninduced | 4.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.932 |
| SRR8400027 | Control - Root | 4.754 |