Gene detail

Gene detail information of Glyur000294s00011847

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24510.1	5.00E-70	HXXXD-type acyl-transferase family protein
NR	XP_003526552.1	0	PREDICTED: protein ECERIFERUM 1-like [Glycine max]
COG	YP_004904226.1	2.00E-06	hypothetical protein KSE_24560 [Kitasatospora setae KM-6054]
Swissprot	tr\|Q39048\|CER2_ARATH	9.00E-91	Protein ECERIFERUM 1
trEMBL	tr\|I1K9R7\|I1K9R7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G10190.1}

Sequence

Transcript Sequence

>Glyur000294s00011847.1
ATCCTGATCANATCGCTGCAACTCTAATATCTCTCTCCTTCTCTCTTTGTCTCTGCGAGTCTAATTAATTCTCCCTTGGGAATGGGTTCACTACCCATTTTGGGAACTCCTCCTCTGATCAGCACGAGGGTTTCAACGGTGGTCCCTGCAACCCCTCGAGGCGAAGAAAACGATGCGTATCAGCTGAACTACATGGACCTCCTCGTGAAGCTCCACTATATTCGACCCGTTTATTTCTTCAGTCCCGAAGCGGTGCAGGGGCTCTCAATATTCGACTTGAAAGCACCCATGTTTCCGCTACTGGACCGGTACTCACACGTGTCGGGTCGTATCAGGAGATCCGAAGAATCGGGAAGACCGNTCATAAAGTACAACGACGCAGGAGTGCGCATCGCTGAGTCGTACTNTGACAGAACACTCACAGAATGGTTCGATGAAAATGGGAATTACCCTGTAGAAGGACTTGTCCCTGATCACGTGATTGGCCCTGATATTGCTTTCTCTCCTTTGGTTTTCGTCAAGTTCACTTTCTTCAAATGTGGAGGACTCTCTGTGGGACTAAGCTGGGCTCACATCCTTGGAGATGCTTTTTCAGCTTTTAACTTCATCANTAAGTGGAGTCAGACACTGGCTGGTGAAGCCCCACCAAAATCTCTTCACATGCCAATCCTCAGTAAACCGCAAATTTTTCTACCTAATTCCGTTTCTGATCAGAACCCCTTTTCCATTAAAAGGGCCACAATAATTGGAGAATACTGGCTCGCTTCCAATGACAGCGATGTGGCCACTCACTCTTTTCACATCACTTCCAAACAACTTCACCATTTGGTTACAAACCAAACCAATATTGACACTACCAAGACCAATAATAAGACCTCGTATTTTGAAGTTATTTCAGCGCTGGTGTGGAAATGTTTGGCTCAAATAAGAGAAGAGCTTGGACNAAGGGTTGTGACAATATGTACAAGTGTCACAAATCGTGCAGAGAATGAATTCCCCTCCAATTATGGATTGTTGTTGAGCAGAATTGAAGCGGATTTTCCAGCTGGGGAATCTGATATATCTGAATTAGCGAGGCTGATTGGTGAGAAAAAATTGAATGAGAATCGTGTCTTGGAAAAGCTGGTGGAGGAAAGTGAGCAAGGGAAAGAGGATTATATAGTTTATGGAGCGAACTTGACATTTGTAGATTTGGAAGAAGCTGACTTTTATGGGGTGAAAATGAATGGAAAGAAACCAATTATGGCGAATTGTAGCTTCCGTGGGGTGGGTGATCAAGGGGTCGTGTTGGTTCTTCCAGCACCAGAAGACAATGATTTGGGTGATGGTAATGGAAGGATAATAACAGTTTCGTTACCAGCTGAGAAAGAACTCGACCAGCTGAAAGATAAGTTAGGAAGAGAATGGGGTATACACTGTTCACGTCCTGGATTTTGATTTTTCTGAAGCGTAACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00294	3643	5952	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000294s00011847.1	PF02458.10	Transferase	18	428	1.10E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.025
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.401
SRR1811619	moderate drought stress	0.412

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.073
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.075
DRR006524	Root Summer glycyrrhizin low producing strain	0.075
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.456
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.386

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.172
SRR2868004	Drought Stress (root)	0.419
SRR2967015	Control (root)	0.307

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.774
SRR9715740	Leaf	11.293
SRR9715741	Leaf	13.618
SRR9715739	Root	0.069
SRR9715742	Root	1.827
SRR9715743	Root	1.796

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.046
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.405
SRR8400027	Control - Root	0.943