Gene detail information of Glyur000293s00015242 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01300.1 | 1.00E-29 | |
| NR | XP_003555943.1 | 3.17E-68 | PREDICTED: uncharacterized protein LOC100795681 [Glycine max] |
| trEMBL | tr|C6TFT5|C6TFT5_SOYBN | 1.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G41130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00293 | 157182 | 157718 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.515 |
| SRR1783600 | control | 4.639 |
| SRR1783602 | moderate drought stress | 4.004 |
| SRR1811619 | moderate drought stress | 3.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 171.596 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 169.122 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 49.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 46.910 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 378.584 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 372.291 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.045 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.207 |
| SRR2868004 | Drought Stress (root) | 57.847 |
| SRR2967015 | Control (root) | 111.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 261.572 |
| SRR9715740 | Leaf | 154.085 |
| SRR9715741 | Leaf | 251.371 |
| SRR9715739 | Root | 110.761 |
| SRR9715742 | Root | 149.592 |
| SRR9715743 | Root | 148.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 630.193 |
| SRR8749028 | MeJA induced 9h | 752.084 |
| SRR8749029 | MeJA induced 9h | 692.547 |
| SRR8749030 | Uninduced | 912.262 |
| SRR8749031 | Uninduced | 777.809 |
| SRR8749032 | Uninduced | 937.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.325 |
| SRR8400027 | Control - Root | 45.984 |