Gene detail

Gene detail information of Glyur000293s00015231

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13240.1	5.00E-52	transcription regulators
NR	XP_007143007.1	6.63E-84	hypothetical protein PHAVU_007G035700g [Phaseolus vulgaris]
trEMBL	tr\|V7BEW0\|V7BEW0_PHAVU	2.00E-84	Uncharacterized protein {ECO:0000313\|EMBL:ESW15001.1}

Sequence

Transcript Sequence

>Glyur000293s00015231.1
GCCAAACATTCGCTAAGTACTGAAGATTCTCTCTCAGCCACGTATCTCTTCTCTTTCTGATATCTAAATCAAAAAACCGAATATTCGACTTTCACCGCTTCGAAATNCCCTTTTATTTATCCCCAAAGGTTCAAACCCTAACACTAACATCGCAAATCTGCGGGTTATCTATCCAAAGCGCCAACGAACCAAGCAATTTTCGTCATCTTTCTCTCCGGGAGAGTCGCTTGGCAAATACAGAAAACAAGGGTTTTAACCTGCAATTCTCGTTGTCAAGTTGGAATTATTGGAACCATAGTTCGTCATGAAGTTCCTGGAGTGTGCTCCTCTGGACCGGTAATTGTAATTTCTAAAGAGTTTGAATTGAATTATGGGATTTTGTTGCATAATTTTGGCACATAATAGAGCCCGGTAAAAAAACATTTTCAGGCTTAACGATTTCTTGAGTAATTTGAATCTGGGAGAACGAACTATCAAAGGATGCCTTGAAGCTTATAGTTGCAAACATGCTGGAACGGATAAAAAACTCTCTATCAGTCTGGATAATGAGATTCTTGATTATCTCGGGAAATCATCTGACACTGATTCTTCCTCACCAGATGAATCCTTATTAACCAGAACCAGCCGAAAGACATTGGTATACCTGGTTCTTGCCCTCTATCACATGTATCCAGATTATGACTTCAGTGCAGTTAAAGCTCACCAGTTTTTCACAGAGGAATCATGGGACAGTTTTAAGCAGATTTTTGACACCTACATGTTTGAAGCCTCAAAGGAATGGGTTGAAACCTTTGGGGGTGTTTCTCTGCTGGACGCCTTGTTCAAGGCCCTTGATGAGGTGGTGAAGTTAGCGGATTGTGAAATTTATGGTTATGACCCGGATTCTGAGGCTGATCCGTTACCAGAGAGAGGAGCAATATGGTCCTTTAATTTCTTGTTTTACAATAGAAAGCTTAAGCGGATTGTGACTTTTCGTTTCAGCTGTTTTAGTAACTTGATTGCTGATGGATTTCTTGTCGACGAGATTCACAATGAGTATGATGAAGAAATATTTGCTGACATGGATATATGAGTCAATACACGGCATCTATTATGTTAGCATATCCAGACTCTCATCCTCCCATGTGTAGTTCTGTATTATATAAGATCGTTTCACATGTGTAGCTTTGTAAATTGAAGATAATTTCTGTGGGACCTGAGTCATATAGTATTTGCATCACCTCTCGTATGCATATAGTAGATTTAGCATCTGTATCCCCACCTAGTGGGATAAGGCTTGGTTGTTGTAGCATATGTATCTTCCTCGAATGCATATAGTAGATTTGGAATCTGCATTCTGTATGCATATAACTAATCGTAGTCAGGACACTCTGGTGTGTAATAACAACAGAAAGTACTTGTTTGGAATTCGAGCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00293	106030	108968	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0016480 negative regulation of transcription from RNA polymerase III promoter

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000293s00015231.1	PF09174.5	Maf1	1	103	3.90E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.836
SRR1783600	control	15.943
SRR1783602	moderate drought stress	19.837
SRR1811619	moderate drought stress	19.927

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.716
DRR006520	Root Summer glycyrrhizin high producing strain	22.466
DRR006521	Root Winter glycyrrhizin high producing strain	54.055
DRR006522	Root Winter glycyrrhizin high producing strain	52.168
DRR006523	Root Summer glycyrrhizin low producing strain	13.662
DRR006524	Root Summer glycyrrhizin low producing strain	13.563
DRR006525	Leaf Summer glycyrrhizin high producing strain	37.591
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.478

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	33.608
SRR2868004	Drought Stress (root)	55.233
SRR2967015	Control (root)	58.008

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	55.496
SRR9715740	Leaf	85.496
SRR9715741	Leaf	64.717
SRR9715739	Root	11.442
SRR9715742	Root	14.548
SRR9715743	Root	14.446

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.453
SRR8749028	MeJA induced 9h	13.724
SRR8749029	MeJA induced 9h	6.983
SRR8749030	Uninduced	18.609
SRR8749031	Uninduced	20.252
SRR8749032	Uninduced	25.020

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	45.933
SRR8400027	Control - Root	47.902