Gene detail

Gene detail information of Glyur000293s00015226

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G15125.1	1.00E-85	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	AES62823.2	0	SAM-dependent carboxyl methyltransferase [Medicago truncatula]
Swissprot	tr\|Q9LS10\|MT810_ARATH	1.00E-84	Probable S-adenosylmethionine-dependent methyltransferase At5g38100
trEMBL	tr\|G7IAV2\|G7IAV2_MEDTR	0	SAM-dependent carboxyl methyltransferase {ECO:0000313\|EMBL:AES62823.2}

Sequence

Transcript Sequence

>Glyur000293s00015226.1
AGAGTAGGAATTGAAGCTGCCAAAAGCTTAATCCAAGGGGCAATAGCCAACAAATTTGACCCCAAGACTATTATTTCTGCTTCTTCTAGGACCCCAATTTGCATTGCAGACTTGGGGTGCTCCACAGGGCCAAATACCTTCTTTGCAGTTCAATGCATAATAGAAGCAATAGAGCTCCAATACCAGTCACAAGGTCCTGCTGTCCCAGAGTTCCAAGTTCTGTTCAATGACCAGGTGTCAAATGACTTCAACACACTCTTCAGAAAGCTTCCTTCCAACAGAAAGTACTTTGCTGCTGGGGTTCCTGGCTCTTTCTATGGAAGATTGTTTCCAAGGAAGAGCCTTCATGTGGTTCACTCATCTGCATCACTAAACTGGATCTCTAAGGTTCCCAAAGAGATTACAGACACAACTTCTGCTGCTTGGAACAAGGGGAGAATTCATTACACAAATGCCCCCAAGGAAGTTGTAGATGCCTACCTTAGTCAGTATCAGAAAGACATGCAAGTTTTCTTGCATGCCAGAGCACAAGAGCTTGTGGGCAATGGGATAATGGCACTTCAAATCCCTGCTGCAAATGATGTAGATTTTGATTCAGATATGCACTGTGGTCAAAATTTTGAACTTCTGGGAACTTGCCTAGTGGATATGGCCAAGGAGGGAAAGGTCAGTGAAGAAAAAGTGGACTCTTTCAATCTGCCCATCTTTTTCCCACCCCTTAAGGATCTGAAGAAAATTCTTGAAAGTAATGATGATTTCAGCATCGAGCAAATGGAAACAATGGATACTAATAAAGCACTATCCAGCCCAGTTAATGTTCATGCGTATGTTTCCCTCCACAGAGCTGCGCTGGAAGGACTAATTGAGAACCATTTTGGAGATGGAATTATTGATGAACTCTTTGATCGCTATGCTAAGAAAGTGATGGAAAACCCTGCTATAATGGATATCCAAAAGCTAAATATAGTTGGACTCTTTGTCCTTCTTAGGCGCAAGCTGCAGTGTGAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00293	74916	76375	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000293s00015226.1	PF03492.10	Methyltransf_7	24	332	2.80E-111

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.992
SRR1783600	control	3.797
SRR1783602	moderate drought stress	3.496
SRR1811619	moderate drought stress	3.663

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.631
DRR006520	Root Summer glycyrrhizin high producing strain	3.361
DRR006521	Root Winter glycyrrhizin high producing strain	2.218
DRR006522	Root Winter glycyrrhizin high producing strain	1.731
DRR006523	Root Summer glycyrrhizin low producing strain	7.628
DRR006524	Root Summer glycyrrhizin low producing strain	7.318
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.367
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.365

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.127
SRR2868004	Drought Stress (root)	12.089
SRR2967015	Control (root)	6.243

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.603
SRR9715740	Leaf	0.291
SRR9715741	Leaf	0.970
SRR9715739	Root	5.221
SRR9715742	Root	3.656
SRR9715743	Root	4.218

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.205
SRR8749028	MeJA induced 9h	5.418
SRR8749029	MeJA induced 9h	0.573
SRR8749030	Uninduced	44.012
SRR8749031	Uninduced	39.764
SRR8749032	Uninduced	20.523

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.400
SRR8400027	Control - Root	11.314