Gene detail information of Glyur000293s00015224 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003536646.1 | 1.40E-97 | PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform 1 [Glycine max] |
| trEMBL | tr|I1LEN8|I1LEN8_SOYBN | 5.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G41300.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00293 | 63535 | 64554 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.739 |
| SRR1783600 | control | 52.699 |
| SRR1783602 | moderate drought stress | 68.208 |
| SRR1811619 | moderate drought stress | 68.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 258.702 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 256.280 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 131.304 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 127.071 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 334.017 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 335.852 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 142.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 143.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 91.183 |
| SRR2868004 | Drought Stress (root) | 128.141 |
| SRR2967015 | Control (root) | 244.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 388.522 |
| SRR9715740 | Leaf | 266.531 |
| SRR9715741 | Leaf | 392.987 |
| SRR9715739 | Root | 16.146 |
| SRR9715742 | Root | 101.449 |
| SRR9715743 | Root | 91.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 352.265 |
| SRR8749028 | MeJA induced 9h | 400.419 |
| SRR8749029 | MeJA induced 9h | 436.755 |
| SRR8749030 | Uninduced | 790.773 |
| SRR8749031 | Uninduced | 604.422 |
| SRR8749032 | Uninduced | 550.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 90.861 |
| SRR8400027 | Control - Root | 116.671 |