Gene detail information of Glyur000291s00016229


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51650.12.00E-27ATP synthase epsilon chain, mitochondrial
NRXP_002517228.16.05E-35ATP synthase epsilon chain, mitochondrial, putative [Ricinus communis]
Swissprottr|Q96253|ATP5E_ARATH7.00E-35ATP synthase subunit epsilon, mitochondrial
trEMBLtr|B9RU09|B9RU09_RICCO2.00E-35ATP synthase epsilon chain, mitochondrial, putative {ECO:0000313|EMBL:EEF45128.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00291147958149984+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0015986  ATP synthesis coupled proton transport


cellular_component

GO:0000275  mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)


molecular_function

GO:0046933  proton-transporting ATP synthase activity, rotational mechanism

GO:0046961  proton-transporting ATPase activity, rotational mechanism

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000291s00016229.1PF04627.8ATP-synt_Eps9572.10E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control268.800
SRR1783600control284.530
SRR1783602moderate drought stress168.882
SRR1811619moderate drought stress175.464

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain133.914
DRR006520Root Summer glycyrrhizin high producing strain132.249
DRR006521Root Winter glycyrrhizin high producing strain64.146
DRR006522Root Winter glycyrrhizin high producing strain69.355
DRR006523Root Summer glycyrrhizin low producing strain112.106
DRR006524Root Summer glycyrrhizin low producing strain115.345
DRR006525Leaf Summer glycyrrhizin high producing strain142.715
DRR006526Leaf Summer glycyrrhizin high producing strain149.104

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)406.832
SRR2868004Drought Stress (root)298.560
SRR2967015Control (root)242.749

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf241.069
SRR9715740Leaf194.775
SRR9715741Leaf193.699
SRR9715739Root152.779
SRR9715742Root117.768
SRR9715743Root128.050

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h176.502
SRR8749028MeJA induced 9h137.222
SRR8749029MeJA induced 9h240.486
SRR8749030Uninduced119.412
SRR8749031Uninduced91.943
SRR8749032Uninduced66.088

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root380.332
SRR8400027Control - Root411.024

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved