Gene detail information of Glyur000291s00016220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31540.1 | 2.00E-172 | exocyst subunit exo70 family protein G1 |
| NR | XP_003529717.1 | 0 | PREDICTED: exocyst complex component EXO70A1-like [Glycine max] |
| Swissprot | tr|Q9LZD3|E70A1_ARATH | 3.00E-45 | Exocyst complex component EXO70A1 |
| trEMBL | tr|K7KYU0|K7KYU0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G00603.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00291 | 116028 | 118103 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000291s00016220.1 | PF03081.10 | Exo70 | 288 | 650 | 2.10E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.753 |
| SRR1783600 | control | 1.817 |
| SRR1783602 | moderate drought stress | 1.677 |
| SRR1811619 | moderate drought stress | 1.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.731 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.754 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.435 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.402 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.252 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.168 |
| SRR2868004 | Drought Stress (root) | 4.435 |
| SRR2967015 | Control (root) | 4.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.093 |
| SRR9715740 | Leaf | 0.030 |
| SRR9715741 | Leaf | 0.031 |
| SRR9715739 | Root | 0.448 |
| SRR9715742 | Root | 1.180 |
| SRR9715743 | Root | 1.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.092 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.492 |
| SRR8400027 | Control - Root | 7.687 |