Gene detail information of Glyur000291s00016215


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21180.10autoinhibited Ca(2+)-ATPase 9
NRKHN39354.10Calcium-transporting ATPase 9, plasma membrane-type [Glycine soja]
COGYP_501831.14.00E-133calcium-translocating P-type ATPase, PMCA-type [Methanospirillum hungatei JF-1]
Swissprottr|Q9LF79|ACA8_ARATH0Calcium-transporting ATPase 8, plasma membrane-type
trEMBLtr|I1KVR4|I1KVR4_SOYBN0Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold002916255691028+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0070588  calcium ion transmembrane transport


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0005388  calcium-transporting ATPase activity

GO:0005516  calmodulin binding

GO:0005524  ATP binding

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000291s00016215.1PF12515.3CaATP_NAI44887.30E-19
Glyur000291s00016215.1PF00690.21Cation_ATPase_N1462141.60E-13
Glyur000291s00016215.1PF00122.15E1-E2_ATPase2333752.20E-35
Glyur000291s00016215.1PF00122.15E1-E2_ATPase3864283.30E-08
Glyur000291s00016215.1PF13246.1Hydrolase_like24755491.70E-12
Glyur000291s00016215.1PF00702.21Hydrolase5827351.20E-20
Glyur000291s00016215.1PF00689.16Cation_ATPase_C8069816.70E-43
Glyur000291s00016215.2PF12515.3CaATP_NAI44887.20E-19
Glyur000291s00016215.2PF00690.21Cation_ATPase_N1462141.60E-13
Glyur000291s00016215.2PF00122.15E1-E2_ATPase2333762.00E-35
Glyur000291s00016215.2PF00122.15E1-E2_ATPase3764111.50E-07
Glyur000291s00016215.2PF13246.1Hydrolase_like24585321.70E-12
Glyur000291s00016215.2PF00702.21Hydrolase5657181.20E-20
Glyur000291s00016215.2PF00689.16Cation_ATPase_C7899646.60E-43
Glyur000291s00016215.3PF12515.3CaATP_NAI44887.30E-19
Glyur000291s00016215.3PF00690.21Cation_ATPase_N1462141.60E-13
Glyur000291s00016215.3PF00122.15E1-E2_ATPase2333752.20E-35
Glyur000291s00016215.3PF00122.15E1-E2_ATPase3864283.30E-08
Glyur000291s00016215.3PF13246.1Hydrolase_like24755491.70E-12
Glyur000291s00016215.3PF00702.21Hydrolase5827351.20E-20
Glyur000291s00016215.3PF00689.16Cation_ATPase_C8069816.70E-43
Glyur000291s00016215.4PF12515.3CaATP_NAI44887.00E-19
Glyur000291s00016215.4PF00690.21Cation_ATPase_N1041696.80E-13
Glyur000291s00016215.4PF00122.15E1-E2_ATPase1883302.10E-35
Glyur000291s00016215.4PF00122.15E1-E2_ATPase3413833.10E-08
Glyur000291s00016215.4PF13246.1Hydrolase_like24305041.60E-12
Glyur000291s00016215.4PF00702.21Hydrolase5376901.10E-20
Glyur000291s00016215.4PF00689.16Cation_ATPase_C7619366.30E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.162
SRR1783600control15.158
SRR1783602moderate drought stress8.840
SRR1811619moderate drought stress8.856

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.728
DRR006520Root Summer glycyrrhizin high producing strain6.547
DRR006521Root Winter glycyrrhizin high producing strain4.602
DRR006522Root Winter glycyrrhizin high producing strain4.577
DRR006523Root Summer glycyrrhizin low producing strain6.242
DRR006524Root Summer glycyrrhizin low producing strain6.367
DRR006525Leaf Summer glycyrrhizin high producing strain27.762
DRR006526Leaf Summer glycyrrhizin high producing strain27.443

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)20.292
SRR2868004Drought Stress (root)23.852
SRR2967015Control (root)24.329

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf40.525
SRR9715740Leaf39.686
SRR9715741Leaf47.464
SRR9715739Root1.937
SRR9715742Root10.344
SRR9715743Root9.369

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.133
SRR8749028MeJA induced 9h43.388
SRR8749029MeJA induced 9h32.166
SRR8749030Uninduced30.497
SRR8749031Uninduced24.840
SRR8749032Uninduced21.442

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root15.014
SRR8400027Control - Root9.157

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved