Gene detail information of Glyur000290s00015802 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17630.1 | 6.00E-144 | Nucleotide/sugar transporter family protein |
| NR | XP_003537155.1 | 0 | PREDICTED: xylulose 5-phosphate/phosphate translocator, chloroplastic-like [Glycine max] |
| Swissprot | tr|Q9LF61|XPT_ARATH | 0 | Xylulose 5-phosphate/phosphate translocator, chloroplastic (Precursor) |
| trEMBL | tr|K7LI69|K7LI69_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G11378.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00290 | 139617 | 142090 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000290s00015802.1 | PF00892.15 | EamA | 143 | 258 | 2.30E-05 |
| Glyur000290s00015802.1 | PF03151.11 | TPT | 269 | 413 | 5.40E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.311 |
| SRR1783600 | control | 8.293 |
| SRR1783602 | moderate drought stress | 3.263 |
| SRR1811619 | moderate drought stress | 3.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.093 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.121 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.698 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.537 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.705 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.726 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.736 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.956 |
| SRR2868004 | Drought Stress (root) | 4.462 |
| SRR2967015 | Control (root) | 5.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.009 |
| SRR9715740 | Leaf | 23.405 |
| SRR9715741 | Leaf | 17.028 |
| SRR9715739 | Root | 3.122 |
| SRR9715742 | Root | 5.036 |
| SRR9715743 | Root | 4.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.106 |
| SRR8749028 | MeJA induced 9h | 3.297 |
| SRR8749029 | MeJA induced 9h | 0.744 |
| SRR8749030 | Uninduced | 0.776 |
| SRR8749031 | Uninduced | 0.160 |
| SRR8749032 | Uninduced | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.673 |
| SRR8400027 | Control - Root | 9.168 |