Gene detail information of Glyur000290s00015800 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45710.1 | 2.00E-07 | Zinc-binding ribosomal protein family protein |
| NR | AFW67637.1 | 1.64E-21 | hypothetical protein ZEAMMB73_763884 [Zea mays] |
| Swissprot | tr|O64650|RS271_ARATH | 4.00E-20 | 40S ribosomal protein S27-1 |
| trEMBL | tr|A0A096S6F3|A0A096S6F3_MAIZE | 6.00E-22 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G132121_P03} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00290 | 125362 | 128455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 85.697 |
| SRR1783600 | control | 86.150 |
| SRR1783602 | moderate drought stress | 45.829 |
| SRR1811619 | moderate drought stress | 45.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 132.432 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 130.557 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 63.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 62.728 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.724 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.200 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.049 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 208.548 |
| SRR2868004 | Drought Stress (root) | 127.941 |
| SRR2967015 | Control (root) | 113.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 88.906 |
| SRR9715740 | Leaf | 82.015 |
| SRR9715741 | Leaf | 82.038 |
| SRR9715739 | Root | 123.367 |
| SRR9715742 | Root | 111.341 |
| SRR9715743 | Root | 102.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 271.798 |
| SRR8749028 | MeJA induced 9h | 107.555 |
| SRR8749029 | MeJA induced 9h | 150.387 |
| SRR8749030 | Uninduced | 22.584 |
| SRR8749031 | Uninduced | 9.515 |
| SRR8749032 | Uninduced | 23.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 137.342 |
| SRR8400027 | Control - Root | 110.919 |