Gene detail information of Glyur000290s00015793 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006586830.1 | 2.41E-51 | PREDICTED: uncharacterized protein LOC102668456 [Glycine max] |
| trEMBL | tr|K7LBE6|K7LBE6_SOYBN | 9.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02545.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00290 | 88490 | 89203 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000290s00015793.1 | PF04043.10 | PMEI | 44 | 189 | 1.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.413 |
| SRR1783600 | control | 0.332 |
| SRR1783602 | moderate drought stress | 0.440 |
| SRR1811619 | moderate drought stress | 0.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.863 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.789 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.908 |
| SRR2868004 | Drought Stress (root) | 3.848 |
| SRR2967015 | Control (root) | 3.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.465 |
| SRR9715740 | Leaf | 0.166 |
| SRR9715741 | Leaf | 0.171 |
| SRR9715739 | Root | 0.070 |
| SRR9715742 | Root | 0.497 |
| SRR9715743 | Root | 0.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.127 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.264 |
| SRR8400027 | Control - Root | 1.598 |