Gene detail

Gene detail information of Glyur000290s00015786

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G34690.1	2.00E-75	Glycolipid transfer protein (GLTP) family protein
NR	KEH37046.1	1.10E-127	glycolipid transfer protein [Medicago truncatula]
trEMBL	tr\|A0A072V5Z0\|A0A072V5Z0_MEDTR	4.00E-128	Glycolipid transfer protein {ECO:0000313\|EMBL:KEH37046.1}

Sequence

Transcript Sequence

>Glyur000290s00015786.1
CATATGCTTCTAAGAGAATACTGAATACGTGATATTTTAGGAAGGAAAAGAGAAGAGAATACGTGATATTTGTATACTTTGCCAGCCCACACAGTTAATAACAGGCACGGCGCACTCCACCTCCATCGCGAAGAAAGCATAGCATATTGATTGATATTGTTATGATGCCGCAAAAAACAATTTGGCAGTGCTGAGTTGAGGAACACAAAAAACAGACACCTAAGTGCGTTTGTTCCTCTGGTTTGTTACGATGGCAGAGGAGGGGAACGGCGACAAAACACTGCATCAAATTGCAGACTCATTCAAAAACCTCGCAAACGCTGTCGCCGATTCACAGAGCGCACAGGTGGAGCTTGCTCCCTTCTCGCGAGCCTGCTCTCTCATTTCCCCTCTCTTCGGATGCTTGGGCATCGCCTTCAAGTTCGCCGAAAAGGATTACGTTGCCAAGGTTAATGATCTGGCTGAGGCATCAAAGTCCATTCAGACCTTGCATTCTTTGATTGATCGGGATGTGCAAGCTAATTCTGTCAGGACCGCAGGCAGCCATACTAGAAATCTGTTGAGAGTAAAGCGTGGGATCGACATGGTCAGAGTACTCTTCGAGCAAATGATAGTCACTGAGGGAAATTCCCTTAGGGATCCAGCTTCCAAGGCTTACGAACAAGTATTTGCACCATACCATGGTTGGGCCATCAGGAAGGCTGTTTCTGCCGGGATGTATGTCCTTCCTACAAAGGAACAGCTTTTGAACAAACTCAATGAGGATGAAGCGTCAGCCAAAGTCCAAATGCAAATTTATGTCTCGGCATCAGCATCTGTAATCCAGTACATTGACAAACTCTTTGTTTCCAGAGACTTGGGAGTAGATTGGTGATCCTTGGATTGTATTCAGATTGTACAATGTAATTTGATATCATAAAGTTGTATGAGATTATTCATCTATTTAGTATTAATTTATTATAGAATTTGTCTATATTGCAATAGATGTTTAAGAGTAAACTTTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00290	48527	52181	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0046836 glycolipid transport

cellular_component
GO:0005737 cytoplasm

molecular_function

GO:0017089 glycolipid transporter activity

GO:0051861 glycolipid binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000290s00015786.1	PF08718.6	GLTP	32	172	2.20E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	25.122
SRR1783600	control	25.236
SRR1783602	moderate drought stress	21.154
SRR1811619	moderate drought stress	21.136

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	30.096
DRR006520	Root Summer glycyrrhizin high producing strain	29.693
DRR006521	Root Winter glycyrrhizin high producing strain	78.024
DRR006522	Root Winter glycyrrhizin high producing strain	76.803
DRR006523	Root Summer glycyrrhizin low producing strain	61.776
DRR006524	Root Summer glycyrrhizin low producing strain	62.381
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.170
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.014

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.268
SRR2868004	Drought Stress (root)	14.883
SRR2967015	Control (root)	22.631

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.251
SRR9715740	Leaf	18.220
SRR9715741	Leaf	13.462
SRR9715739	Root	8.457
SRR9715742	Root	6.310
SRR9715743	Root	6.703

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.099
SRR8749028	MeJA induced 9h	8.172
SRR8749029	MeJA induced 9h	8.522
SRR8749030	Uninduced	14.825
SRR8749031	Uninduced	9.044
SRR8749032	Uninduced	10.357

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.680
SRR8400027	Control - Root	23.785