Gene detail

Gene detail information of Glyur000290s00015779

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06730.1	2.00E-100	Peroxidase superfamily protein
NR	XP_004486564.1	0	PREDICTED: uncharacterized protein LOC101505702 [Cicer arietinum]
Swissprot	tr\|Q9LEH3\|PER15_IPOBA	3.00E-128	Peroxidase 15 {ECO:0000303\|PubMed:17936696} (Precursor)
trEMBL	tr\|G7IJU0\|G7IJU0_MEDTR	0	Peroxidase family protein {ECO:0000313\|EMBL:AES64742.1}

Sequence

Transcript Sequence

>Glyur000290s00015779.1
CTACAACACCACACGCACGTTGTTCTAATATCAGTGAGGAAAAAAATGAGTTCCTTTCGTTTCACAGTGACAGCTCTGTGCTGTGTAATGGTTGTGCTTGGAGGGTTACCCTTCTCTTCAGATGCACAACTCGATCCCTCTTTTTACAGGGACACTTGTCCAAAAGTTCATTCAATAGTGCGTGAAGTCGTAAGGGAAGTTTCTAAGAAAGATCCCCGTATGCTTGCTAGCCTCGTCAGGCTTCACTTTCATGACTGTTTCGTTCTGGGCTGTGATGCATCAATTTTGTTGAACAACTCTGCCACGAATCCCACGATAGTGAGCGAGCAACAAGCTTTCCCAAACAACAACTCCATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACCGCTGTGGAAAAAGCTTGTCCAAACACAGTTTCTTGTGCTGATATACTTGCACTTGCTGCAGAGATATCCTCAGTTCTGGCTCACGGTCCTGATTGGAAAGTTCCATTGGGAAGAAGGGATGGTCTAACAGCAAACCGAACCCTTGCTAATCAAAACCTGCCAGCTCCATTTTTCACACTAGATCAACTCAAAGCTGCATTTGCTGCTCAAGGCCTCGACACTACCGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGTAGGAGTCAGTGCTCTGCATTCGTTGATCGATTGTACAACTTCAGCAGCACTGGCAAACCTGATCCAACACTTGACACGAATTACTTGAAAGAACTGCGCAAGATATGCCCCAATGGTGGACCTGGCACTAACCTTGCCAATTTTGACCCAACCACTCCTGATACAATAGACAAGAACTACTACTCCAATCTTCAGGTTAAAAAAGGTTTGCTTCAGAGTGACCAAGAGTTGTTCTCAACATCTGGTGCAGATACCATTAGCATTGTCAAGAGGTTCAGCAGTGACCAAAAGGTTTTCTTTGATAGCTTTGAGGCTTCAATGATTAAGATGGGTAATATTGGAGTGATAACTGGGAAGAAAGGAGAAATTAGAAAACATTGCAACTTTGTTAACAAAAAATCTGCCCAACTAGATATTGAGACTGTGGAGTCCAGTGAATCACAAGAGGAGGTGGTTGTGTTTGGAGGGTTACCCTTCTCTTCAGATGCACAACTTGATCCCTCCTTCTACAGGGACACTTGTCCTAAGGTCAGTTCAATTGTGCGCGAAGTCGTGAGGAACGTTTCTAAGACAGATCCTCGCATGCTTGCAAGTCTCATCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGATGCATCAGTTTTGCTAAACAACACTGCCACGATAGTGAGCGAGCAAGAAGCTTTCCCAAACATCAACTCGTTAAGAGGTTTGGATGTTGTGAACCAGATCAAGACAGCGGTGGAAAATGCTTGTCCTAACACATCTGGGGGTCCTGATTGGAAAGTTCCCTTGGGAAGAAGGGATGGTCTAACAGCAAACCAAACCCTTGCTAATCAAAATCTTCCAGGTCCCTCTTTCAACCTAACTCAACTTAAAGCCGCATTTGCTGCTCAAGGCCTCAACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGTAGGAGTCACTGCTTTTTATTCAGTGACCGATTGTACAACTTCAGCAACACTGGCAAACCTGATCCAACTCTTAACACTACTTACTTACAAGAATTGCGCAAGANATGCCCCAATGGTGGACCCAGCACTANCCTTGCCAATTTTGACCCAACCACTCCTGATACATTGGACAAGAACTACTACTCCAATCTTCAGNTTNAAAAGGGGTTGCTTCAGAGTGACCAAGTGTTGTTCTCNACATCNGGTGCAGANACCATTAGCATTGTCAACAAGTTCAGCAGTAACCAAAANGCTTTCTTTGATAGCTTTGAGGCTGCAATGATTAAGATGGGTAATATTGGAGTGCTAACCGGGAACAAAGGAGANATTAGAAAGCATTGCAACTTTGTTAACAAAAAGTCTGCTGAACTAGATATTGAGACTGTGGCCTCACAAGAGGAGGGTATGGTTAGCTCAATTAGCTCAATCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00290	9592	16956	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000290s00015779.1	PF00141.18	peroxidase	45	296	9.70E-72
Glyur000290s00015779.1	PF00141.18	peroxidase	383	614	2.60E-56

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.057
SRR1783600	control	6.888
SRR1783602	moderate drought stress	2.218
SRR1811619	moderate drought stress	2.180

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.735
DRR006520	Root Summer glycyrrhizin high producing strain	2.421
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	2.823
DRR006524	Root Summer glycyrrhizin low producing strain	2.705
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.220
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.217

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	177.253
SRR2868004	Drought Stress (root)	219.139
SRR2967015	Control (root)	222.594

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.345
SRR9715740	Leaf	14.000
SRR9715741	Leaf	10.769
SRR9715739	Root	15.113
SRR9715742	Root	39.363
SRR9715743	Root	32.354

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.041
SRR8749028	MeJA induced 9h	75.018
SRR8749029	MeJA induced 9h	77.876
SRR8749030	Uninduced	281.558
SRR8749031	Uninduced	334.850
SRR8749032	Uninduced	209.677

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	86.840
SRR8400027	Control - Root	66.698