Gene detail information of Glyur000289s00018731 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004515051.1 | 0 | PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cicer arietinum] |
| trEMBL | tr|K7LE93|K7LE93_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G29146.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 173344 | 177256 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018731.1 | PF02892.10 | zf-BED | 45 | 88 | 5.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.583 |
| SRR1783600 | control | 7.616 |
| SRR1783602 | moderate drought stress | 8.619 |
| SRR1811619 | moderate drought stress | 8.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.278 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.066 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.356 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.823 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.742 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.389 |
| SRR2868004 | Drought Stress (root) | 8.228 |
| SRR2967015 | Control (root) | 8.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.538 |
| SRR9715740 | Leaf | 8.002 |
| SRR9715741 | Leaf | 7.827 |
| SRR9715739 | Root | 0.466 |
| SRR9715742 | Root | 3.936 |
| SRR9715743 | Root | 2.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.806 |
| SRR8749028 | MeJA induced 9h | 23.209 |
| SRR8749029 | MeJA induced 9h | 26.863 |
| SRR8749030 | Uninduced | 14.778 |
| SRR8749031 | Uninduced | 27.609 |
| SRR8749032 | Uninduced | 18.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.866 |
| SRR8400027 | Control - Root | 7.024 |