Gene detail information of Glyur000289s00018712 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17860.1 | 2.00E-34 | Kunitz family trypsin and protease inhibitor protein |
| NR | AFK41478.1 | 1.09E-126 | unknown [Medicago truncatula] |
| Swissprot | tr|P13087|MIRA_SYNDU | 6.00E-46 | Miraculin (Precursor) |
| trEMBL | tr|I3SMI6|I3SMI6_MEDTR | 4.00E-127 | Uncharacterized protein {ECO:0000313|EMBL:AFK41478.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 70931 | 71572 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018712.1 | PF00197.13 | Kunitz_legume | 29 | 210 | 1.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.114 |
| SRR1783600 | control | 0.114 |
| SRR1783602 | moderate drought stress | 0.689 |
| SRR1811619 | moderate drought stress | 0.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.717 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.806 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.429 |
| SRR2868004 | Drought Stress (root) | 57.024 |
| SRR2967015 | Control (root) | 40.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.409 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.204 |
| SRR9715739 | Root | 0.308 |
| SRR9715742 | Root | 0.096 |
| SRR9715743 | Root | 0.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 355.537 |
| SRR8749028 | MeJA induced 9h | 986.749 |
| SRR8749029 | MeJA induced 9h | 784.963 |
| SRR8749030 | Uninduced | 3930.685 |
| SRR8749031 | Uninduced | 5103.859 |
| SRR8749032 | Uninduced | 7070.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.268 |
| SRR8400027 | Control - Root | 17.763 |