Gene detail information of Glyur000289s00018704 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17860.1 | 2.00E-44 | Kunitz family trypsin and protease inhibitor protein |
| NR | AFK39812.1 | 7.83E-111 | unknown [Lotus japonicus] |
| Swissprot | tr|P13087|MIRA_SYNDU | 1.00E-42 | Miraculin (Precursor) |
| trEMBL | tr|I3SHS0|I3SHS0_LOTJA | 3.00E-111 | Uncharacterized protein {ECO:0000313|EMBL:AFK39812.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 43330 | 43965 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018704.1 | PF00197.13 | Kunitz_legume | 30 | 209 | 3.50E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 58.832 |
| SRR1783600 | control | 58.630 |
| SRR1783602 | moderate drought stress | 76.125 |
| SRR1811619 | moderate drought stress | 74.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 141.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 138.375 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 87.240 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 84.275 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 102.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 103.318 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.455 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 183.211 |
| SRR2868004 | Drought Stress (root) | 610.598 |
| SRR2967015 | Control (root) | 636.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.375 |
| SRR9715740 | Leaf | 16.776 |
| SRR9715741 | Leaf | 33.116 |
| SRR9715739 | Root | 15.735 |
| SRR9715742 | Root | 62.078 |
| SRR9715743 | Root | 50.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 278.851 |
| SRR8749028 | MeJA induced 9h | 1099.846 |
| SRR8749029 | MeJA induced 9h | 985.471 |
| SRR8749030 | Uninduced | 619.726 |
| SRR8749031 | Uninduced | 901.814 |
| SRR8749032 | Uninduced | 1600.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 224.614 |
| SRR8400027 | Control - Root | 101.195 |