Gene detail information of Glyur000289s00018703 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23370.1 | 7.00E-36 | GRAM domain-containing protein / ABA-responsive protein-related |
| NR | KEH26878.1 | 5.16E-89 | GRAM domain protein/ABA-responsive-like protein [Medicago truncatula] |
| Swissprot | tr|Q9FMW4|GEML8_ARATH | 2.00E-43 | Putative GEM-like protein 8 |
| trEMBL | tr|A0A072UCV9|A0A072UCV9_MEDTR | 2.00E-89 | GRAM domain protein/ABA-responsive-like protein {ECO:0000313|EMBL:KEH26878.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 40386 | 41582 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018703.1 | PF02893.15 | GRAM | 66 | 104 | 3.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.127 |
| SRR1783600 | control | 2.086 |
| SRR1783602 | moderate drought stress | 2.832 |
| SRR1811619 | moderate drought stress | 2.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.821 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.846 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.298 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.775 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.503 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.445 |
| SRR2868004 | Drought Stress (root) | 27.888 |
| SRR2967015 | Control (root) | 8.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.659 |
| SRR9715740 | Leaf | 1.252 |
| SRR9715741 | Leaf | 1.253 |
| SRR9715739 | Root | 1.362 |
| SRR9715742 | Root | 1.311 |
| SRR9715743 | Root | 1.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.681 |
| SRR8749028 | MeJA induced 9h | 5.067 |
| SRR8749029 | MeJA induced 9h | 7.310 |
| SRR8749030 | Uninduced | 3.639 |
| SRR8749031 | Uninduced | 16.015 |
| SRR8749032 | Uninduced | 7.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.611 |
| SRR8400027 | Control - Root | 6.903 |