Gene detail information of Glyur000288s00019878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56250.1 | 3.00E-06 | |
| NR | XP_003552150.1 | 5.33E-17 | PREDICTED: uncharacterized protein LOC100807848 [Glycine max] |
| trEMBL | tr|K7MPG7|K7MPG7_SOYBN | 2.00E-17 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G02531.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00288 | 160852 | 163635 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.210 |
| SRR1783600 | control | 5.179 |
| SRR1783602 | moderate drought stress | 5.842 |
| SRR1811619 | moderate drought stress | 5.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.547 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.095 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.046 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.917 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.884 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.696 |
| SRR2868004 | Drought Stress (root) | 5.715 |
| SRR2967015 | Control (root) | 4.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.574 |
| SRR9715740 | Leaf | 1.847 |
| SRR9715741 | Leaf | 0.209 |
| SRR9715739 | Root | 2.262 |
| SRR9715742 | Root | 0.052 |
| SRR9715743 | Root | 0.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.621 |
| SRR8749028 | MeJA induced 9h | 3.019 |
| SRR8749029 | MeJA induced 9h | 1.678 |
| SRR8749030 | Uninduced | 1.177 |
| SRR8749031 | Uninduced | 0.459 |
| SRR8749032 | Uninduced | 0.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.439 |
| SRR8400027 | Control - Root | 6.077 |