Gene detail information of Glyur000288s00019869 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10970.3 | 4.00E-27 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| NR | NP_001241961.1 | 9.41E-36 | uncharacterized protein LOC100817685 [Glycine max] |
| trEMBL | tr|C6T7U6|C6T7U6_SOYBN | 4.00E-36 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU17898.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00288 | 95996 | 96538 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.394 |
| SRR1783600 | control | 7.923 |
| SRR1783602 | moderate drought stress | 12.741 |
| SRR1811619 | moderate drought stress | 9.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.325 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.976 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.577 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.968 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.643 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.416 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.723 |
| SRR2868004 | Drought Stress (root) | 6.243 |
| SRR2967015 | Control (root) | 8.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.385 |
| SRR9715740 | Leaf | 9.171 |
| SRR9715741 | Leaf | 17.772 |
| SRR9715739 | Root | 1.174 |
| SRR9715742 | Root | 1.336 |
| SRR9715743 | Root | 0.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.180 |
| SRR8749028 | MeJA induced 9h | 41.349 |
| SRR8749029 | MeJA induced 9h | 146.537 |
| SRR8749030 | Uninduced | 158.993 |
| SRR8749031 | Uninduced | 266.870 |
| SRR8749032 | Uninduced | 225.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.867 |
| SRR8400027 | Control - Root | 3.043 |