Gene detail information of Glyur000288s00019864 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40480.1 | 2.00E-93 | Plant protein of unknown function (DUF827) |
| NR | XP_003538502.1 | 0 | PREDICTED: WEB family protein At2g40480-like [Glycine max] |
| Swissprot | tr|Q5XVC7|Y2048_ARATH | 1.00E-115 | WEB family protein At2g40480 |
| trEMBL | tr|K7LRT2|K7LRT2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G35930.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00288 | 77082 | 80407 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000288s00019864.1 | PF05701.6 | WEMBL | 46 | 128 | 2.20E-12 |
| Glyur000288s00019864.1 | PF05701.6 | WEMBL | 178 | 412 | 1.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.183 |
| SRR1783600 | control | 12.307 |
| SRR1783602 | moderate drought stress | 13.489 |
| SRR1811619 | moderate drought stress | 13.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 85.962 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 84.896 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.173 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.900 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.683 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.330 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.658 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.582 |
| SRR2868004 | Drought Stress (root) | 42.600 |
| SRR2967015 | Control (root) | 54.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.942 |
| SRR9715740 | Leaf | 2.908 |
| SRR9715741 | Leaf | 3.953 |
| SRR9715739 | Root | 3.102 |
| SRR9715742 | Root | 11.446 |
| SRR9715743 | Root | 10.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.821 |
| SRR8749028 | MeJA induced 9h | 2.751 |
| SRR8749029 | MeJA induced 9h | 2.480 |
| SRR8749030 | Uninduced | 1.788 |
| SRR8749031 | Uninduced | 0.491 |
| SRR8749032 | Uninduced | 0.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.397 |
| SRR8400027 | Control - Root | 94.812 |