Gene detail

Gene detail information of Glyur000287s00022142

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G23850.1	Arabidopsis thaliana protein of unknown function (DUF821)
NR	XP_004514091.1	PREDICTED: O-glucosyltransferase rumi homolog isoform X1 [Cicer arietinum]
trEMBL	tr\|A0A072TVA2\|A0A072TVA2_MEDTR	Glycosyltransferase family 90 protein {ECO:0000313\|EMBL:KEH17460.1}

Sequence

Transcript Sequence

>Glyur000287s00022142.1
CACACTATATATAAACGCAGTCACGCAAGCTGGCATACTCACGAGATTCAACTTCAAATCAAAAGATTTCCCCATCTCTCCATTTTCAATTGACTCCCTCTCTATCTCTCTCTTCCTTTCTCTCTCCATTTAATTATCTTTTTTTATTTTAATAAATTTCATCCTTTTGAATTGAATCTCTGATCTAAAAGGCCCCTTAACGTGTAGAAAGGTTAGACATCCTTTTTGAGACTCTCACTCAGAGACCCTTTTCCCATTCTTGTCAACTTCAGAGAATTATTAATATAAACACAAGAAAGAAAGAAAAAAAATTTCACAGCCACCCCATTGCACAAAACAACATCCACAAAAAAAAATTACAAAAAAAAAAGAAGGGTGGTGTTGAGGTCTTGCATTTTTTGCAGCAGAGAGACACGTCCAATTGGCCAAAACTCACCGACCCAATTGAAGAACCATTTCAAAGTTTGCATCTTTGAGAATTTTAAAGGACAAGAAGGTTGATTTCTCAAAAGGGTATAGGTGGTGTGGTTGGAAGTGACCAAAAAAAAAAAGAAGAAGAAAGAAGACATTAACAAATGGTTGCAAGAAGCAGAGCATGAGAGATAACAACGTTGGGGTTGTGTTGGGTCAAGAGNATCACGGATCGGGGCATTTTCGTCAATTGAAAGATCCATTCATGAAATCGTTTTCGAGATCCACCGTTGTTTTGGTCTTCCCCACCGTACTCATAGTCGGCGCGTTGGTGTACACGCGCTTCCTCGGCACACACGAGGTTTTTCCCGCGGGTAGATCTACCAAACCAATACTAACAACCACCTCAACAACATACGAAGTACCACAAAACAAACCCGAGAAGCAAATAGAGATCCCACTGAACTGCAGTGGATACAACCTCACCGGAACATGCCCCAACCACCAAATACCCCCAATGGACGATCACGACCGTTCATCAATTTCCACGTGTCCAGATTACTTCCGTTGGATCCACGAGGACCTAAGGCCATGGGCCCACAAGGGAATAACGAAGGAGATGGTGGAGAGGGCAAAGGCAACAGCGAATTTCAAATTGGTGATATTGAATGGAAAAGCTTATTTGGAGACATATGAGAAGGCGTTTCAAACAAGGGATACTTTTACCCTGTGGGGGATCCTACAGTTGTTAAGGAAGTACCCTGGAATGGTGCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCAGTGATTCCAGCTGATAATTACAGTTCTGGCCCTAATGCTTTGGACCCACCACCACTCTTTCGTTATTGTGGGAATGATGGTACCTTGGATATTGTCTTCCCTGATTGGTCCTATTGGGGATGGCCTGAGGTTAATATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAGGGCAACAAGAGGACAGAATGGNTGAACAGAGAGCCTTATGCTTACTGGAAAGGTAATCCCTCAGTTGCTGAAACNAGACAAGACCTCATGAAATGCAATGTTTCTGACAAACAAGATTGGAATGCTCGTTTATATGCCCAGGATTGGGGACGAGAGTCACAAGAAGGGTACAAGAAATCAGACTTGGCAGGCCAATGCACTTACAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTTAGTGAAAAATACATTCTAGCATGCGATTCTCCCACTTTACTTGTAAAGCCACATTACTATGACTTTTTCACAAGAGGGTTAATTCCGGTGCACCATTATTGGCCCATTAAGGAAGATGACAAGTGCAAGTCCATTAAGTTTGCTGTGGATTGGGGCAATAGTCACAAGGAAAAGGCACATAATATTGGGAAAGCAGCAAGTAACTTCATTCAAGAAGAGTTGAAGATGGATTATGTGTATGACTACATGTTTCACCTCCTAAGTTCTTATGCCAAACTCTTCAGATACAAACCCTCTATAAGTGCTAATGCTGTTGAACTATGCGTGGAGTCAATGGTTTGTAAAGCAGAAGGAAGAGAGAAGAAATTTATGATGGAATCATTGGTCAAGGGTCCTGCAAACACCAATCCATGCACCATGCCTCCCCCTTATGACCCTCCATCTTTGCATGCTCATTTAAAGAGAAAGGAAGGTTCAATTCAAAGAGTAGAATTCTGGGAGAAAAGCTACTGGGAGAAACAAATATGAGATCTTAATGTATATTTCTTTTTTTCCCAGAAATGTTCAAATGAACATGTTCATTCTTAGAGATTAATGTTGTTTCCCCTTCCACATTAGAGGGTTCTTTTGGGGGAGATATAAATAGTCTACACTCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00287	73063	86705	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT90

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000287s00022142.1	PF05686.7	Glyco_transf_90	119	515	4.00E-192

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	28.958
SRR1783600	control	28.869
SRR1783602	moderate drought stress	32.172
SRR1811619	moderate drought stress	31.984

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	34.160
DRR006520	Root Summer glycyrrhizin high producing strain	34.279
DRR006521	Root Winter glycyrrhizin high producing strain	37.143
DRR006522	Root Winter glycyrrhizin high producing strain	35.499
DRR006523	Root Summer glycyrrhizin low producing strain	12.158
DRR006524	Root Summer glycyrrhizin low producing strain	12.311
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.871
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.674

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.717
SRR2868004	Drought Stress (root)	15.332
SRR2967015	Control (root)	25.753

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.339
SRR9715740	Leaf	4.930
SRR9715741	Leaf	2.071
SRR9715739	Root	3.956
SRR9715742	Root	17.115
SRR9715743	Root	14.568

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	52.562
SRR8749028	MeJA induced 9h	74.215
SRR8749029	MeJA induced 9h	85.398
SRR8749030	Uninduced	78.865
SRR8749031	Uninduced	77.385
SRR8749032	Uninduced	82.353

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	40.288
SRR8400027	Control - Root	41.950