Gene detail information of Glyur000286s00016511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53190.1 | 3.00E-35 | Nodulin MtN3 family protein |
| NR | XP_004498397.1 | 6.22E-59 | PREDICTED: bidirectional sugar transporter SWEET3-like [Cicer arietinum] |
| Swissprot | tr|Q6NQN5|SWET3_ARATH | 1.00E-42 | Bidirectional sugar transporter SWEET3 |
| trEMBL | tr|I1KAN3|I1KAN3_SOYBN | 2.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00286 | 186780 | 187373 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000286s00016511.1 | PF03083.11 | MtN3_slv | 9 | 97 | 5.30E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.220 |
| SRR1783600 | control | 1.070 |
| SRR1783602 | moderate drought stress | 1.235 |
| SRR1811619 | moderate drought stress | 1.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.762 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.594 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.184 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.246 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.244 |
| SRR2868004 | Drought Stress (root) | 51.567 |
| SRR2967015 | Control (root) | 21.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.268 |
| SRR9715740 | Leaf | 14.054 |
| SRR9715741 | Leaf | 9.616 |
| SRR9715739 | Root | 0.737 |
| SRR9715742 | Root | 3.553 |
| SRR9715743 | Root | 1.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.775 |
| SRR8400027 | Control - Root | 5.165 |