Gene detail information of Glyur000286s00016493 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHG13300.1 | 4.11E-15 | hypothetical protein F383_08963 [Gossypium arboreum] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00286 | 53026 | 54309 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.707 |
| SRR1783600 | control | 33.337 |
| SRR1783602 | moderate drought stress | 18.141 |
| SRR1811619 | moderate drought stress | 19.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.478 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.604 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.773 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.858 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.827 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.400 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.033 |
| SRR2868004 | Drought Stress (root) | 0.095 |
| SRR2967015 | Control (root) | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.083 |
| SRR9715740 | Leaf | 0.237 |
| SRR9715741 | Leaf | 0.102 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.203 |
| SRR8749028 | MeJA induced 9h | 0.175 |
| SRR8749029 | MeJA induced 9h | 0.064 |
| SRR8749030 | Uninduced | 0.046 |
| SRR8749031 | Uninduced | 0.421 |
| SRR8749032 | Uninduced | 0.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.141 |
| SRR8400027 | Control - Root | 0.076 |