Gene detail information of Glyur000286s00016487 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489490.1 | 1.75E-54 | PREDICTED: uncharacterized protein LOC101490661 [Cicer arietinum] |
| trEMBL | tr|C6TJH9|C6TJH9_SOYBN | 8.00E-42 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23069.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00286 | 35855 | 36361 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.481 |
| SRR1783600 | control | 9.121 |
| SRR1783602 | moderate drought stress | 2.247 |
| SRR1811619 | moderate drought stress | 2.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.220 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.215 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 479.734 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 489.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.164 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.574 |
| SRR2868004 | Drought Stress (root) | 69.544 |
| SRR2967015 | Control (root) | 213.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 67.611 |
| SRR9715740 | Leaf | 164.461 |
| SRR9715741 | Leaf | 77.021 |
| SRR9715739 | Root | 274.281 |
| SRR9715742 | Root | 299.415 |
| SRR9715743 | Root | 227.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 175.874 |
| SRR8749028 | MeJA induced 9h | 154.023 |
| SRR8749029 | MeJA induced 9h | 128.691 |
| SRR8749030 | Uninduced | 177.306 |
| SRR8749031 | Uninduced | 81.763 |
| SRR8749032 | Uninduced | 123.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.574 |
| SRR8400027 | Control - Root | 233.744 |