Gene detail information of Glyur000283s00016958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G25270.1 | 3.00E-55 | nodulin MtN21 /EamA-like transporter family protein |
| NR | KEH31266.1 | 0 | auxin-induced 5NG4-like protein [Medicago truncatula] |
| Swissprot | tr|Q4PT23|WTR6_ARATH | 4.00E-84 | WAT1-related protein At1g25270 |
| trEMBL | tr|A0A072UPG7|A0A072UPG7_MEDTR | 0 | Auxin-induced 5NG4-like protein {ECO:0000313|EMBL:KEH31266.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00283 | 140927 | 147696 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000283s00016958.1 | PF00892.15 | EamA | 21 | 151 | 2.90E-13 |
| Glyur000283s00016958.1 | PF00892.15 | EamA | 200 | 327 | 5.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.079 |
| SRR1783600 | control | 0.085 |
| SRR1783602 | moderate drought stress | 0.145 |
| SRR1811619 | moderate drought stress | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.196 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 85.333 |
| SRR2868004 | Drought Stress (root) | 34.360 |
| SRR2967015 | Control (root) | 39.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.399 |
| SRR9715740 | Leaf | 22.178 |
| SRR9715741 | Leaf | 13.949 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.290 |
| SRR9715743 | Root | 0.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.722 |
| SRR8749028 | MeJA induced 9h | 9.120 |
| SRR8749029 | MeJA induced 9h | 5.951 |
| SRR8749030 | Uninduced | 32.154 |
| SRR8749031 | Uninduced | 10.039 |
| SRR8749032 | Uninduced | 20.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.597 |
| SRR8400027 | Control - Root | 3.055 |