Gene detail information of Glyur000283s00016935.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64550.1 | 0 | loricrin-related |
| NR | XP_004504769.1 | 9.19E-137 | PREDICTED: zinc finger protein 36, C3H1 type-like 2-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SZ67|WRK19_ARATH | 3.00E-62 | Probable WRKY transcription factor 19 |
| trEMBL | tr|A0A072UPE4|A0A072UPE4_MEDTR | 1.00E-90 | Zinc finger C-x8-C-x5-C-x3-H type protein {ECO:0000313|EMBL:KEH31246.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00283 | 19229 | 29448 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C3H |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.252 |
| SRR1783600 | control | 26.386 |
| SRR1783602 | moderate drought stress | 21.606 |
| SRR1811619 | moderate drought stress | 21.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.758 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.606 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.797 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.478 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.476 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 67.418 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.731 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.941 |
| SRR2868004 | Drought Stress (root) | 44.251 |
| SRR2967015 | Control (root) | 34.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.522 |
| SRR9715740 | Leaf | 47.699 |
| SRR9715741 | Leaf | 51.224 |
| SRR9715739 | Root | 21.165 |
| SRR9715742 | Root | 38.947 |
| SRR9715743 | Root | 34.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.547 |
| SRR8749028 | MeJA induced 9h | 13.134 |
| SRR8749029 | MeJA induced 9h | 21.918 |
| SRR8749030 | Uninduced | 15.850 |
| SRR8749031 | Uninduced | 15.195 |
| SRR8749032 | Uninduced | 15.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.630 |
| SRR8400027 | Control - Root | 39.433 |