Gene detail information of Glyur000282s00015775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02130.1 | 7.00E-07 | low-molecular-weight cysteine-rich 68 |
| NR | XP_007033927.1 | 1.70E-33 | Scorpion toxin-like knottin superfamily protein [Theobroma cacao] |
| Swissprot | tr|Q07502|DEF_SOYBN | 9.00E-24 | Defensin-like protein (Precursor) |
| trEMBL | tr|A0A061EJM1|A0A061EJM1_THECC | 6.00E-34 | Scorpion toxin-like knottin superfamily protein {ECO:0000313|EMBL:EOY04853.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00282 | 191198 | 191591 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000282s00015775.1 | PF00304.15 | Gamma-thionin | 30 | 76 | 3.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.684 |
| SRR1783600 | control | 0.445 |
| SRR1783602 | moderate drought stress | 3.478 |
| SRR1811619 | moderate drought stress | 3.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.157 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.968 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.383 |
| SRR2868004 | Drought Stress (root) | 13.045 |
| SRR2967015 | Control (root) | 14.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.601 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 8.917 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.837 |
| SRR9715743 | Root | 2.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.030 |
| SRR8400027 | Control - Root | 6.496 |