Gene detail information of Glyur000282s00015762 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04290.1 | 8.00E-52 | Thioesterase superfamily protein |
| NR | XP_003523189.1 | 2.84E-87 | PREDICTED: acyl-coenzyme A thioesterase 13-like isoform X1 [Glycine max] |
| COG | YP_003953140.1 | 3.00E-18 | hypothetical protein STAUR_3523 [Stigmatella aurantiaca DW4/3-1] |
| trEMBL | tr|I1JXU3|I1JXU3_SOYBN | 1.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00282 | 100255 | 101755 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000282s00015762.1 | PF03061.17 | 4HBT | 61 | 137 | 2.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.350 |
| SRR1783600 | control | 30.548 |
| SRR1783602 | moderate drought stress | 22.011 |
| SRR1811619 | moderate drought stress | 21.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.740 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.612 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.536 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.694 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.303 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.399 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.971 |
| SRR2868004 | Drought Stress (root) | 61.479 |
| SRR2967015 | Control (root) | 53.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.879 |
| SRR9715740 | Leaf | 51.583 |
| SRR9715741 | Leaf | 50.239 |
| SRR9715739 | Root | 14.982 |
| SRR9715742 | Root | 19.288 |
| SRR9715743 | Root | 16.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.957 |
| SRR8749028 | MeJA induced 9h | 29.501 |
| SRR8749029 | MeJA induced 9h | 22.629 |
| SRR8749030 | Uninduced | 29.648 |
| SRR8749031 | Uninduced | 15.112 |
| SRR8749032 | Uninduced | 24.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.154 |
| SRR8400027 | Control - Root | 56.732 |