Gene detail information of Glyur000282s00015749 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59880.1 | 1.00E-11 | |
| NR | NP_001235543.1 | 2.70E-39 | uncharacterized protein LOC100527144 [Glycine max] |
| trEMBL | tr|C6T3F5|C6T3F5_SOYBN | 1.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G17040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00282 | 19632 | 19988 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.522 |
| SRR1783600 | control | 15.522 |
| SRR1783602 | moderate drought stress | 7.478 |
| SRR1811619 | moderate drought stress | 7.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.750 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.873 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.969 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 133.668 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 128.854 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.219 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.287 |
| SRR2868004 | Drought Stress (root) | 94.527 |
| SRR2967015 | Control (root) | 128.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 87.206 |
| SRR9715740 | Leaf | 65.750 |
| SRR9715741 | Leaf | 117.165 |
| SRR9715739 | Root | 129.181 |
| SRR9715742 | Root | 128.787 |
| SRR9715743 | Root | 117.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 126.925 |
| SRR8749028 | MeJA induced 9h | 169.295 |
| SRR8749029 | MeJA induced 9h | 164.759 |
| SRR8749030 | Uninduced | 246.603 |
| SRR8749031 | Uninduced | 194.148 |
| SRR8749032 | Uninduced | 295.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.693 |
| SRR8400027 | Control - Root | 109.092 |