Gene detail information of Glyur000281s00018242 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47310.1 | 2.00E-75 | |
| NR | XP_004499101.1 | 0 | PREDICTED: uncharacterized protein LOC101493524 [Cicer arietinum] |
| trEMBL | tr|G7I4J2|G7I4J2_MEDTR | 0 | Signal peptidase I, putative {ECO:0000313|EMBL:AES59509.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00281 | 87459 | 90068 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.962 |
| SRR1783600 | control | 24.388 |
| SRR1783602 | moderate drought stress | 32.421 |
| SRR1811619 | moderate drought stress | 32.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.388 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.734 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.328 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.038 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.486 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.945 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.382 |
| SRR2868004 | Drought Stress (root) | 31.175 |
| SRR2967015 | Control (root) | 39.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.645 |
| SRR9715740 | Leaf | 26.052 |
| SRR9715741 | Leaf | 24.599 |
| SRR9715739 | Root | 32.473 |
| SRR9715742 | Root | 22.760 |
| SRR9715743 | Root | 22.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.183 |
| SRR8749028 | MeJA induced 9h | 83.937 |
| SRR8749029 | MeJA induced 9h | 74.105 |
| SRR8749030 | Uninduced | 23.444 |
| SRR8749031 | Uninduced | 44.031 |
| SRR8749032 | Uninduced | 64.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.638 |
| SRR8400027 | Control - Root | 24.744 |