Gene detail information of Glyur000281s00018240.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18990.1 | 4.00E-20 | AP2/B3-like transcriptional factor family protein |
| NR | XP_004499102.1 | 0 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Cicer arietinum] |
| Swissprot | tr|Q8S2E6|Y1235_ORYSJ | 3.00E-35 | B3 domain-containing protein Os01g0723500 |
| trEMBL | tr|K7M5J0|K7M5J0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G08641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00281 | 80925 | 86104 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000281s00018240.1 | PF02362.16 | B3 | 21 | 106 | 3.30E-12 |
| Glyur000281s00018240.1 | PF02362.16 | B3 | 256 | 347 | 1.90E-14 |
| Glyur000281s00018240.1 | PF02362.16 | B3 | 484 | 572 | 1.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.433 |
| SRR1783600 | control | 24.448 |
| SRR1783602 | moderate drought stress | 37.733 |
| SRR1811619 | moderate drought stress | 37.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.735 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.469 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.010 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.613 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.550 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.032 |
| SRR2868004 | Drought Stress (root) | 31.641 |
| SRR2967015 | Control (root) | 35.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.561 |
| SRR9715740 | Leaf | 17.644 |
| SRR9715741 | Leaf | 19.919 |
| SRR9715739 | Root | 6.301 |
| SRR9715742 | Root | 21.104 |
| SRR9715743 | Root | 18.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.718 |
| SRR8749028 | MeJA induced 9h | 46.043 |
| SRR8749029 | MeJA induced 9h | 45.510 |
| SRR8749030 | Uninduced | 25.926 |
| SRR8749031 | Uninduced | 25.082 |
| SRR8749032 | Uninduced | 26.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.626 |
| SRR8400027 | Control - Root | 27.399 |