Gene detail information of Glyur000279s00013265 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48770.1 | 0 | DNA binding;ATP binding |
| NR | XP_003637749.1 | 0 | hypothetical protein MTR_101s0015 [Medicago truncatula] |
| COG | YP_005441349.1 | 3.00E-72 | hypothetical protein CLDAP_14120 [Caldilinea aerophila DSM 14535 = NBRC 104270] |
| trEMBL | tr|G8A099|G8A099_MEDTR | 0 | ATP/DNA-binding protein {ECO:0000313|EMBL:KEH38271.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00279 | 206431 | 213685 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.780 |
| SRR1783600 | control | 9.839 |
| SRR1783602 | moderate drought stress | 6.664 |
| SRR1811619 | moderate drought stress | 6.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.834 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.741 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.185 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.633 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.268 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.302 |
| SRR2868004 | Drought Stress (root) | 7.933 |
| SRR2967015 | Control (root) | 6.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.643 |
| SRR9715740 | Leaf | 2.081 |
| SRR9715741 | Leaf | 2.069 |
| SRR9715739 | Root | 1.735 |
| SRR9715742 | Root | 19.907 |
| SRR9715743 | Root | 18.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.712 |
| SRR8749028 | MeJA induced 9h | 0.881 |
| SRR8749029 | MeJA induced 9h | 0.504 |
| SRR8749030 | Uninduced | 0.123 |
| SRR8749031 | Uninduced | 0.031 |
| SRR8749032 | Uninduced | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.341 |
| SRR8400027 | Control - Root | 2.570 |