Gene detail

Gene detail information of Glyur000279s00013255

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G58220.1	3.00E-105	transthyretin-like protein
NR	XP_004510200.1	0	PREDICTED: uric acid degradation bifunctional protein TTL-like isoform X1 [Cicer arietinum]
COG	YP_005006240.1	7.00E-32	OHCU decarboxylase [Niastella koreensis GR20-10]
Swissprot	tr\|Q9LVM5\|TTHL_ARATH	6.00E-130	5-hydroxyisourate hydrolase
trEMBL	tr\|I1MM35\|I1MM35_SOYBN	0	5-hydroxyisourate hydrolase {ECO:0000256\|RuleBase:RU004307}

Sequence

Transcript Sequence

>Glyur000279s00013255.1
CTTTGTTATGCGAGAAGAGCAGTGGAAGCTGACACAGAACAACCATTTCTCTTCCGAAAATCACAGGCAGATCCTCACAAGCAAAAAGCAGTTCGCAACTGAATTGTCCACNACAGAATAGAAGAGGAGTGATCTCAGTGAGTGTTTGAAGGATGGAATTGGTTTTCGNGGAGAAGGATTTCTTATCATGCTGTGGAAGCACCAGATTCGCCAAGGACATGGCTTTGGCCTCTCCTTTCTCTTCCCTCCAGCATGCCCTTTCCGTTGCCAGAGACATTTGGTTCAACAAAGTTGATGTCAGTGGTTGGCTACAAGCCTTCTCTGCTCACCCTCCCATTGGTCAAACCCGTTCCCCCTCTCATGCCTCTCAAACCAGTGCTCAGTTGAGTAAGGGAGAGCAATCAACTGCATTGGCAACTGCTACTGGTTCNAGTTTACAGGAACTATCTGAATGGAATGCTCGGTACATGCAAAAATTTGGNTTTGTATTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTCGCTGANCTGAAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAAATTGCAGCTCAGGAGCAAATGAAAATTACAGAATTACGCCTTGCGAAGCTATTTTCAAGTAGAGAAAACACATCTTCTACAAATGATAAGTATTCCACTGTTGCTGCTAAAAAGGCAGAAGAAGATCGTATAAGCATCATCGGTGGTCATGTGACTGCTGCTTCGGAGAGTTTAACAGGAAAATCAATCCAAAATCCATCCAGAACTCGGCCACCCATTACCACTCACGTGTTGGATGTATCACGAGGCTGTCCAGCTGCTGGCATTGAGGTACTTTTGGAGATGTGGAGAGGCAATCAGGCTTGTCCGACATTCGGGGCAGCAGATGGTAGCGGTTGGGTGGTTCAGGGGTCTTCGACGACGGATCCAGATGGTCGCAGTGGGCAACTGTTGAGCATAGTTGATTATGTGAACCCAGGGATATACAGGATAAGTTTCAACACTGGGAAGTACAACCCAAATGGTTTCTTTCCTTATGTGTCTGTTGTTTTTGAAATCCTCGAGTCACAGAAAAGGCAACATTTTCATGTTCCTCTCCTGCTTTCACCATTTTCCTTCAGCACTTACCGCGGAAGCTAGAGAAATATTTGCTCAATCATTGCAGCAACTAAGATATCTGGGGTTTCCTTACATGCCATGAATATGAATATCTGAAAGTTTTCATGAAGTGAACTTGTGTTTGTGCCCATAGAACATGGGAAAGATACCAAATATAGAAAGATAATCAGTGTATCAATGGTGTTTGCTTGACGTACGTTATCAGTACTTTGGGATAATAAATGAGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00279	150326	154105	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13484	TTHL	EC:3.5.2.17 4.1.1.97	Purine metabolism	map00230

Gene Ontology

biological_process
GO:0006144 purine nucleobase metabolic process

molecular_function
GO:0033971 hydroxyisourate hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000279s00013255.1	PF09349.5	OHCU_decarbox	10	158	1.00E-32
Glyur000279s00013255.1	PF00576.16	Transthyretin	214	333	6.80E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	49.660
SRR1783600	control	49.903
SRR1783602	moderate drought stress	70.487
SRR1811619	moderate drought stress	70.442

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	67.470
DRR006520	Root Summer glycyrrhizin high producing strain	66.967
DRR006521	Root Winter glycyrrhizin high producing strain	19.525
DRR006522	Root Winter glycyrrhizin high producing strain	18.427
DRR006523	Root Summer glycyrrhizin low producing strain	65.580
DRR006524	Root Summer glycyrrhizin low producing strain	64.486
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.399
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.225

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	45.352
SRR2868004	Drought Stress (root)	49.531
SRR2967015	Control (root)	49.168

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.143
SRR9715740	Leaf	27.130
SRR9715741	Leaf	28.106
SRR9715739	Root	40.322
SRR9715742	Root	36.155
SRR9715743	Root	35.158

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.247
SRR8749028	MeJA induced 9h	20.788
SRR8749029	MeJA induced 9h	13.249
SRR8749030	Uninduced	9.317
SRR8749031	Uninduced	3.953
SRR8749032	Uninduced	5.615

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	49.237
SRR8400027	Control - Root	45.215