Gene detail information of Glyur000279s00013254 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29000.1 | 7.00E-28 | Heavy metal transport/detoxification superfamily protein |
| NR | KHM99995.1 | 1.23E-122 | hypothetical protein glysoja_032113 [Glycine soja] |
| trEMBL | tr|K7MFV2|K7MFV2_SOYBN | 1.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G08920.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00279 | 146572 | 148654 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000279s00013254.1 | PF00403.21 | HMA | 36 | 94 | 3.70E-11 |
| Glyur000279s00013254.1 | PF00403.21 | HMA | 126 | 182 | 9.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.348 |
| SRR1783600 | control | 19.611 |
| SRR1783602 | moderate drought stress | 17.899 |
| SRR1811619 | moderate drought stress | 17.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.831 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 54.632 |
| SRR2868004 | Drought Stress (root) | 29.757 |
| SRR2967015 | Control (root) | 24.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.117 |
| SRR9715740 | Leaf | 0.245 |
| SRR9715741 | Leaf | 0.533 |
| SRR9715739 | Root | 0.805 |
| SRR9715742 | Root | 2.404 |
| SRR9715743 | Root | 1.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.355 |
| SRR8749031 | Uninduced | 0.790 |
| SRR8749032 | Uninduced | 0.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 99.355 |
| SRR8400027 | Control - Root | 88.155 |