Gene detail information of Glyur000279s00013252 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02600.2 | 5.00E-180 | Seven transmembrane MLO family protein |
| NR | XP_004510198.1 | 0 | PREDICTED: MLO-like protein 1-like [Cicer arietinum] |
| Swissprot | tr|O49621|MLO1_ARATH | 0 | MLO-like protein 1 |
| trEMBL | tr|I1JMC1|I1JMC1_SOYBN | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00279 | 133859 | 139006 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000279s00013252.1 | PF03094.10 | Mlo | 6 | 414 | 2.50E-177 |
| Glyur000279s00013252.1 | PF03094.10 | Mlo | 414 | 468 | 4.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.256 |
| SRR1783600 | control | 8.107 |
| SRR1783602 | moderate drought stress | 8.221 |
| SRR1811619 | moderate drought stress | 8.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.862 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.376 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.105 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.850 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.655 |
| SRR2868004 | Drought Stress (root) | 18.697 |
| SRR2967015 | Control (root) | 12.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.313 |
| SRR9715740 | Leaf | 6.356 |
| SRR9715741 | Leaf | 10.483 |
| SRR9715739 | Root | 20.780 |
| SRR9715742 | Root | 10.817 |
| SRR9715743 | Root | 11.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.008 |
| SRR8749028 | MeJA induced 9h | 13.067 |
| SRR8749029 | MeJA induced 9h | 9.269 |
| SRR8749030 | Uninduced | 8.369 |
| SRR8749031 | Uninduced | 1.905 |
| SRR8749032 | Uninduced | 2.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.151 |
| SRR8400027 | Control - Root | 15.198 |