Gene detail information of Glyur000279s00013238 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12830.1 | 1.00E-117 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003521017.2 | 0 | PREDICTED: uncharacterized hydrolase YNR064C [Glycine max] |
| COG | YP_007162052.1 | 1.00E-29 | alpha/beta fold family hydrolase [Cyanobacterium aponinum PCC 10605] |
| trEMBL | tr|I1JME3|I1JME3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G23870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00279 | 40713 | 47224 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000279s00013238.1 | PF12697.2 | Abhydrolase_6 | 179 | 370 | 8.10E-25 |
| Glyur000279s00013238.2 | PF12697.2 | Abhydrolase_6 | 158 | 333 | 4.20E-18 |
| Glyur000279s00013238.3 | PF12697.2 | Abhydrolase_6 | 132 | 313 | 3.80E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.618 |
| SRR1783600 | control | 1.538 |
| SRR1783602 | moderate drought stress | 2.434 |
| SRR1811619 | moderate drought stress | 2.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.465 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.752 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.306 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.011 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.255 |
| SRR2868004 | Drought Stress (root) | 4.024 |
| SRR2967015 | Control (root) | 3.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.827 |
| SRR9715740 | Leaf | 28.065 |
| SRR9715741 | Leaf | 18.386 |
| SRR9715739 | Root | 0.939 |
| SRR9715742 | Root | 1.172 |
| SRR9715743 | Root | 1.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.997 |
| SRR8749028 | MeJA induced 9h | 1.316 |
| SRR8749029 | MeJA induced 9h | 0.722 |
| SRR8749030 | Uninduced | 0.801 |
| SRR8749031 | Uninduced | 0.156 |
| SRR8749032 | Uninduced | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.846 |
| SRR8400027 | Control - Root | 3.476 |