Gene detail information of Glyur000278s00017287 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH34758.1 | 6.22E-08 | protein phosphatase 2C-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LNW3|P2C03_ARATH | 6.00E-07 | Protein phosphatase 2C 3 |
| trEMBL | tr|A0A072V045|A0A072V045_MEDTR | 2.00E-08 | Protein phosphatase 2C-like protein {ECO:0000313|EMBL:KEH34758.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00278 | 121149 | 122289 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.453 |
| SRR1783600 | control | 0.418 |
| SRR1783602 | moderate drought stress | 0.414 |
| SRR1811619 | moderate drought stress | 0.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.397 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.795 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.952 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.615 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.947 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.739 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.674 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.847 |
| SRR2868004 | Drought Stress (root) | 0.113 |
| SRR2967015 | Control (root) | 0.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.073 |
| SRR9715740 | Leaf | 0.009 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.235 |
| SRR9715742 | Root | 0.124 |
| SRR9715743 | Root | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.333 |
| SRR8400027 | Control - Root | 0.868 |