Gene detail information of Glyur000278s00017283 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30135.1 | 2.00E-04 | jasmonate-zim-domain protein 8 |
| NR | XP_003546080.1 | 1.34E-12 | PREDICTED: protein TIFY 5A-like [Glycine max] |
| trEMBL | tr|I1MF23|I1MF23_SOYBN | 5.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G09980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00278 | 91140 | 91631 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.055 |
| SRR1811619 | moderate drought stress | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.352 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.460 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.125 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.348 |
| SRR2868004 | Drought Stress (root) | 0.460 |
| SRR2967015 | Control (root) | 0.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.587 |
| SRR9715740 | Leaf | 1.172 |
| SRR9715741 | Leaf | 13.070 |
| SRR9715739 | Root | 1.651 |
| SRR9715742 | Root | 4.589 |
| SRR9715743 | Root | 4.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.161 |
| SRR8749032 | Uninduced | 1.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.798 |
| SRR8400027 | Control - Root | 0.819 |