Gene detail information of Glyur000277s00017328 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37100.1 | 1.00E-05 | protamine P1 family protein |
| NR | KEH42270.1 | 1.56E-74 | hypothetical protein MTR_1g066750 [Medicago truncatula] |
| trEMBL | tr|A0A072VW07|A0A072VW07_MEDTR | 6.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:KEH42270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00277 | 206494 | 207441 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.039 |
| SRR1783600 | control | 0.039 |
| SRR1783602 | moderate drought stress | 0.119 |
| SRR1811619 | moderate drought stress | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.369 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.340 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.821 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.914 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.932 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.816 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.422 |
| SRR2868004 | Drought Stress (root) | 1.031 |
| SRR2967015 | Control (root) | 1.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.065 |
| SRR9715740 | Leaf | 5.690 |
| SRR9715741 | Leaf | 2.574 |
| SRR9715739 | Root | 0.473 |
| SRR9715742 | Root | 0.346 |
| SRR9715743 | Root | 0.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.956 |
| SRR8749028 | MeJA induced 9h | 25.035 |
| SRR8749029 | MeJA induced 9h | 22.745 |
| SRR8749030 | Uninduced | 1.002 |
| SRR8749031 | Uninduced | 0.314 |
| SRR8749032 | Uninduced | 0.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.833 |
| SRR8400027 | Control - Root | 1.230 |