Gene detail information of Glyur000277s00017321 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35795.1 | 1.00E-35 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_006381490.1 | 1.42E-59 | hypothetical protein POPTR_0006s13340g [Populus trichocarpa] |
| COG | YP_002297911.1 | 1.00E-13 | heat shock protein DnaJ, N-terminal [Rhodospirillum centenum SW] |
| Swissprot | tr|Q8RV04|TI141_ARATH | 8.00E-57 | Mitochondrial import inner membrane translocase subunit TIM14-1 |
| trEMBL | tr|B9MT90|B9MT90_POPTR | 5.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:ERP59287.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00277 | 165211 | 168997 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000277s00017321.1 | PF00226.26 | DnaJ | 55 | 100 | 9.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.746 |
| SRR1783600 | control | 9.977 |
| SRR1783602 | moderate drought stress | 6.223 |
| SRR1811619 | moderate drought stress | 7.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.214 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.467 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.547 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.025 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.964 |
| SRR2868004 | Drought Stress (root) | 23.581 |
| SRR2967015 | Control (root) | 16.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.523 |
| SRR9715740 | Leaf | 21.817 |
| SRR9715741 | Leaf | 20.811 |
| SRR9715739 | Root | 6.635 |
| SRR9715742 | Root | 11.324 |
| SRR9715743 | Root | 8.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.017 |
| SRR8749028 | MeJA induced 9h | 82.585 |
| SRR8749029 | MeJA induced 9h | 177.894 |
| SRR8749030 | Uninduced | 76.818 |
| SRR8749031 | Uninduced | 141.751 |
| SRR8749032 | Uninduced | 209.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.057 |
| SRR8400027 | Control - Root | 14.157 |