Gene detail information of Glyur000277s00017320 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37080.1 | 4.00E-120 | ROP interactive partner 3 |
| NR | KHN48324.1 | 0 | Interactor of constitutive active ROPs 2, chloroplastic [Glycine soja] |
| Swissprot | tr|Q9ZQC5|ICR2_ARATH | 1.00E-163 | Interactor of constitutive active ROPs 2, chloroplastic (Precursor) |
| trEMBL | tr|K7LHI3|K7LHI3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G05670.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00277 | 134221 | 137733 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.425 |
| SRR1783600 | control | 1.357 |
| SRR1783602 | moderate drought stress | 1.256 |
| SRR1811619 | moderate drought stress | 1.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.393 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.283 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.484 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.474 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.002 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.911 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.702 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.363 |
| SRR2868004 | Drought Stress (root) | 14.413 |
| SRR2967015 | Control (root) | 12.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.847 |
| SRR9715740 | Leaf | 2.690 |
| SRR9715741 | Leaf | 2.529 |
| SRR9715739 | Root | 0.091 |
| SRR9715742 | Root | 3.903 |
| SRR9715743 | Root | 3.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.343 |
| SRR8749028 | MeJA induced 9h | 4.162 |
| SRR8749029 | MeJA induced 9h | 4.959 |
| SRR8749030 | Uninduced | 0.252 |
| SRR8749031 | Uninduced | 0.121 |
| SRR8749032 | Uninduced | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.014 |
| SRR8400027 | Control - Root | 8.445 |