Gene detail information of Glyur000276s00017176 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56280.1 | 2.00E-09 | drought-induced 19 |
| NR | AFK36663.1 | 3.40E-55 | unknown [Lotus japonicus] |
| Swissprot | tr|Q688X9|DI191_ORYSJ | 6.00E-09 | Protein DEHYDRATION-INDUCED 19 |
| trEMBL | tr|I3T675|I3T675_LOTJA | 1.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:AFK48017.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00276 | 180300 | 184203 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000276s00017176.1 | PF14571.1 | Di19_C | 118 | 196 | 8.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.346 |
| SRR1783600 | control | 7.347 |
| SRR1783602 | moderate drought stress | 7.359 |
| SRR1811619 | moderate drought stress | 7.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.141 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.436 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.318 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.518 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.868 |
| SRR2868004 | Drought Stress (root) | 6.870 |
| SRR2967015 | Control (root) | 6.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.589 |
| SRR9715740 | Leaf | 25.498 |
| SRR9715741 | Leaf | 23.373 |
| SRR9715739 | Root | 6.968 |
| SRR9715742 | Root | 7.280 |
| SRR9715743 | Root | 7.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.499 |
| SRR8749028 | MeJA induced 9h | 1.388 |
| SRR8749029 | MeJA induced 9h | 0.625 |
| SRR8749030 | Uninduced | 1.055 |
| SRR8749031 | Uninduced | 0.166 |
| SRR8749032 | Uninduced | 0.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.230 |
| SRR8400027 | Control - Root | 9.238 |