Gene detail information of Glyur000276s00017172 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003601184.1 | 7.79E-35 | Phloem specific protein [Medicago truncatula] |
| trEMBL | tr|G7J4R7|G7J4R7_MEDTR | 3.00E-35 | Phloem specific protein {ECO:0000313|EMBL:AES71435.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00276 | 160628 | 164129 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 742.295 |
| SRR1783600 | control | 734.433 |
| SRR1783602 | moderate drought stress | 1172.361 |
| SRR1811619 | moderate drought stress | 1136.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 965.858 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 961.702 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 746.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 722.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2286.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2270.326 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2102.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2094.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 73.053 |
| SRR2868004 | Drought Stress (root) | 423.485 |
| SRR2967015 | Control (root) | 473.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2458.229 |
| SRR9715740 | Leaf | 3205.428 |
| SRR9715741 | Leaf | 3121.929 |
| SRR9715739 | Root | 381.925 |
| SRR9715742 | Root | 1084.772 |
| SRR9715743 | Root | 908.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.084 |
| SRR8749029 | MeJA induced 9h | 0.090 |
| SRR8749030 | Uninduced | 0.241 |
| SRR8749031 | Uninduced | 0.129 |
| SRR8749032 | Uninduced | 0.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 386.277 |
| SRR8400027 | Control - Root | 932.828 |