Gene detail information of Glyur000276s00017166 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63135.1 | 1.00E-22 | |
| NR | KHN19260.1 | 1.24E-62 | hypothetical protein glysoja_012180 [Glycine soja] |
| trEMBL | tr|I1KCB7|I1KCB7_SOYBN | 5.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G18760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00276 | 133284 | 135739 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000276s00017166.1 | PF15243.1 | ANAPC15 | 9 | 98 | 5.40E-20 |
| Glyur000276s00017166.2 | PF15243.1 | ANAPC15 | 9 | 98 | 5.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.274 |
| SRR1783600 | control | 39.915 |
| SRR1783602 | moderate drought stress | 48.439 |
| SRR1811619 | moderate drought stress | 51.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.139 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.757 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 89.379 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 89.518 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 56.918 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.907 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 90.971 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 94.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.533 |
| SRR2868004 | Drought Stress (root) | 34.164 |
| SRR2967015 | Control (root) | 29.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 59.153 |
| SRR9715740 | Leaf | 89.061 |
| SRR9715741 | Leaf | 61.224 |
| SRR9715739 | Root | 14.958 |
| SRR9715742 | Root | 7.174 |
| SRR9715743 | Root | 8.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.129 |
| SRR8749028 | MeJA induced 9h | 45.122 |
| SRR8749029 | MeJA induced 9h | 43.864 |
| SRR8749030 | Uninduced | 18.538 |
| SRR8749031 | Uninduced | 7.444 |
| SRR8749032 | Uninduced | 7.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.877 |
| SRR8400027 | Control - Root | 40.401 |