Gene detail information of Glyur000276s00017164 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHG21077.1 | 2.73E-15 | hypothetical protein F383_04494 [Gossypium arboreum] |
| trEMBL | tr|W9RN37|W9RN37_9ROSA | 5.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:EXB82531.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00276 | 109509 | 110528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 65.615 |
| SRR1783600 | control | 73.969 |
| SRR1783602 | moderate drought stress | 34.322 |
| SRR1811619 | moderate drought stress | 42.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 105.908 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 115.255 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.910 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.005 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 71.552 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 76.866 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.023 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.392 |
| SRR2868004 | Drought Stress (root) | 14.527 |
| SRR2967015 | Control (root) | 12.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.660 |
| SRR9715740 | Leaf | 5.397 |
| SRR9715741 | Leaf | 3.052 |
| SRR9715739 | Root | 3.722 |
| SRR9715742 | Root | 3.873 |
| SRR9715743 | Root | 6.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.787 |
| SRR8749028 | MeJA induced 9h | 1.894 |
| SRR8749029 | MeJA induced 9h | 1.579 |
| SRR8749030 | Uninduced | 1.208 |
| SRR8749031 | Uninduced | 0.679 |
| SRR8749032 | Uninduced | 4.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.687 |
| SRR8400027 | Control - Root | 4.533 |