Gene detail information of Glyur000275s00017065 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN49040.1 | 5.48E-12 | hypothetical protein glysoja_031251 [Glycine soja] |
| trEMBL | tr|I1MJK6|I1MJK6_SOYBN | 2.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G42500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00275 | 203612 | 204663 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.923 |
| SRR1783600 | control | 26.864 |
| SRR1783602 | moderate drought stress | 23.287 |
| SRR1811619 | moderate drought stress | 22.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.868 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.188 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.387 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.473 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.789 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.670 |
| SRR2868004 | Drought Stress (root) | 25.407 |
| SRR2967015 | Control (root) | 16.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.292 |
| SRR9715740 | Leaf | 10.604 |
| SRR9715741 | Leaf | 5.463 |
| SRR9715739 | Root | 6.847 |
| SRR9715742 | Root | 17.285 |
| SRR9715743 | Root | 11.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.437 |
| SRR8749028 | MeJA induced 9h | 182.123 |
| SRR8749029 | MeJA induced 9h | 171.418 |
| SRR8749030 | Uninduced | 13.165 |
| SRR8749031 | Uninduced | 95.389 |
| SRR8749032 | Uninduced | 60.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.262 |
| SRR8400027 | Control - Root | 18.230 |