Gene detail information of Glyur000275s00017053 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08050.1 | 1.00E-23 | Protein of unknown function (DUF1118) |
| NR | XP_004499860.1 | 1.08E-91 | PREDICTED: uncharacterized protein LOC101500340 [Cicer arietinum] |
| trEMBL | tr|I1JWN7|I1JWN7_SOYBN | 3.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G32360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00275 | 102195 | 103933 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000275s00017053.1 | PF06549.7 | DUF1118 | 94 | 206 | 1.10E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.711 |
| SRR1783600 | control | 21.758 |
| SRR1783602 | moderate drought stress | 23.469 |
| SRR1811619 | moderate drought stress | 23.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.720 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.381 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.193 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.031 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 127.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 127.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.511 |
| SRR2868004 | Drought Stress (root) | 5.009 |
| SRR2967015 | Control (root) | 5.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 84.802 |
| SRR9715740 | Leaf | 102.960 |
| SRR9715741 | Leaf | 55.806 |
| SRR9715739 | Root | 17.568 |
| SRR9715742 | Root | 7.228 |
| SRR9715743 | Root | 7.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.724 |
| SRR8749028 | MeJA induced 9h | 10.656 |
| SRR8749029 | MeJA induced 9h | 7.471 |
| SRR8749030 | Uninduced | 4.205 |
| SRR8749031 | Uninduced | 1.590 |
| SRR8749032 | Uninduced | 6.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.082 |
| SRR8400027 | Control - Root | 15.063 |