Gene detail information of Glyur000274s00012543 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004506102.1 | 2.41E-33 | PREDICTED: uncharacterized protein LOC101493010 [Cicer arietinum] |
| trEMBL | tr|K7LTQ5|K7LTQ5_SOYBN | 4.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08805.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00274 | 135838 | 136224 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.506 |
| SRR1783600 | control | 3.909 |
| SRR1783602 | moderate drought stress | 2.017 |
| SRR1811619 | moderate drought stress | 2.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.556 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.684 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.144 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.707 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.575 |
| SRR2868004 | Drought Stress (root) | 2.643 |
| SRR2967015 | Control (root) | 3.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.238 |
| SRR9715740 | Leaf | 0.175 |
| SRR9715741 | Leaf | 0.049 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.206 |
| SRR9715743 | Root | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.157 |
| SRR8749030 | Uninduced | 0.456 |
| SRR8749031 | Uninduced | 0.213 |
| SRR8749032 | Uninduced | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.168 |
| SRR8400027 | Control - Root | 5.432 |