Gene detail information of Glyur000274s00012540 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27920.1 | 5.00E-132 | serine carboxypeptidase-like 51 |
| NR | XP_004506086.1 | 0 | PREDICTED: serine carboxypeptidase-like 51-like isoform X1 [Cicer arietinum] |
| COG | YP_002430787.1 | 2.00E-24 | peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01] |
| Swissprot | tr|Q67Y83|SCP51_ARATH | 0 | Serine carboxypeptidase-like 51 (Precursor) |
| trEMBL | tr|K7LQ97|K7LQ97_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G19680.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00274 | 116649 | 121484 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000274s00012540.1 | PF00450.17 | Peptidase_S10 | 33 | 424 | 9.80E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.119 |
| SRR1783600 | control | 10.133 |
| SRR1783602 | moderate drought stress | 6.401 |
| SRR1811619 | moderate drought stress | 6.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.417 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.213 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.211 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.531 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.607 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.088 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.486 |
| SRR2868004 | Drought Stress (root) | 21.411 |
| SRR2967015 | Control (root) | 17.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 113.752 |
| SRR9715740 | Leaf | 35.140 |
| SRR9715741 | Leaf | 93.267 |
| SRR9715739 | Root | 15.861 |
| SRR9715742 | Root | 37.769 |
| SRR9715743 | Root | 32.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.190 |
| SRR8749028 | MeJA induced 9h | 15.811 |
| SRR8749029 | MeJA induced 9h | 12.527 |
| SRR8749030 | Uninduced | 11.144 |
| SRR8749031 | Uninduced | 1.093 |
| SRR8749032 | Uninduced | 5.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.078 |
| SRR8400027 | Control - Root | 41.569 |